Basic Information
Locus ID:
jg20647
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 19733832 | 19735503 | + | jg20647 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.41 | 27,758.27 Da | 60.24 | 85.25 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 85 | 1.35E-7 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 6 | 122 | 3.4E-12 | - |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 32 | 6.0 | - |
| Coils | Coil | Coil | 244 | 244 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18710.1 | Protein kinase superfamily protein. ATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutation in the BIN2. BIN2 is not allelic to BRI1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus. | 0 |
| RefSeq | XP_047948000.1 | shaggy-related protein kinase eta isoform X2 [Salvia hispanica] | 0 |
| Q39011 | Shaggy-related protein kinase eta OS=Arabidopsis thaliana OX=3702 GN=ASK7 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8M8V692 | non-specific serine/threonine protein kinase OS=Sesamum indicum OX=4182 GN=LOC105167844 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg20647 |
| Apiaceae | Apium graveolens | 1 | Ag11G03458 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103698143 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-10262, nbis-gene-57386 |