Basic Information
Locus ID:
jg20646
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
GSK3
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 19730435 | 19733567 | + | jg20646 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 26,782.80 Da | 34.04 | 87.57 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14137 | STKc_GSK3 | 35 | 235 | 2.28424E-127 | IPR039192 |
| Pfam | PF00069 | Protein kinase domain | 59 | 206 | 3.9E-35 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 53 | 229 | 5.12E-48 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 69 | 238 | 8.0E-53 | - |
| SMART | SM00220 | serkin_6 | 40 | 228 | 1.8E-18 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 239 | 20.753672 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 110 | 122 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko01521 (EGFR tyrosine kinase inhibitor resistance)
map01521 (EGFR tyrosine kinase inhibitor resistance)
ko04012 (ErbB signaling pathway)
map04012 (ErbB signaling pathway)
ko04062 (Chemokine signaling pathway)
map04062 (Chemokine signaling pathway)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04340 (Hedgehog signaling pathway)
map04340 (Hedgehog signaling pathway)
ko04341 (Hedgehog signaling pathway - fly)
map04341 (Hedgehog signaling pathway - fly)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04550 (Signaling pathways regulating pluripotency of stem cells)
map04550 (Signaling pathways regulating pluripotency of stem cells)
map04657 (IL-17 signaling pathway)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
ko04711 (Circadian rhythm - fly)
map04711 (Circadian rhythm - fly)
ko04916 (Melanogenesis)
map04916 (Melanogenesis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18710.1 | Protein kinase superfamily protein. ATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutation in the BIN2. BIN2 is not allelic to BRI1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus. | 0 |
| RefSeq | XP_019236680.1 | PREDICTED: shaggy-related protein kinase eta [Nicotiana attenuata] | 0 |
| Q39011 | Shaggy-related protein kinase eta OS=Arabidopsis thaliana OX=3702 GN=ASK7 PE=1 SV=2 | 0 | |
| TrEMBL | M1CRI7 | non-specific serine/threonine protein kinase OS=Solanum tuberosum OX=4113 GN=102600959 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg20646 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.3AG0014760 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_02.1253.V1.1, AsparagusV1_07.3327.V1.1 ... |
| Hydrocharitaceae | Thalassia testudinum | 3 | gene.Thate03g09050, gene.Thate04g10960, gene.Thate04g20310 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g06350 |