Basic Information
Locus ID:
jg20639
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 19692811 | 19698272 | + | jg20639 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 79,235.67 Da | 39.38 | 98.19 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 443 | 691 | 1.5E-17 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 75 | 5.2E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 102 | 162 | 6.3E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 188 | 5.1E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 437 | 691 | 3.12E-35 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 398 | 509 | 2.6E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 192 | 5.2E-45 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 510 | 702 | 4.3E-28 | - |
| SMART | SM00369 | LRR_typ_2 | 101 | 124 | 4.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 125 | 148 | 98.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 149 | 173 | 81.0 | IPR003591 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 19 | 5.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 388 | 695 | 14.77499 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 104 | 117 | 3.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 125 | 138 | 3.4E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 355 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011085985.1 | LOW QUALITY PROTEIN: protein MALE DISCOVERER 2 [Sesamum indicum] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9HMT3 | Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_08504 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology