Basic Information
Locus ID:
jg20597
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 19376337 | 19380017 | + | jg20597 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 115,237.85 Da | 36.88 | 98.78 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 366 | 387 | 1.1 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 239 | 259 | 1.4 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 51 | 90 | 3.0E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 905 | 1040 | 3.1E-13 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 508 | 530 | 0.91 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 697 | 755 | 2.4E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 904 | 1050 | 6.68E-26 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 402 | 1.53E-47 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 489 | 787 | 3.51E-56 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 409 | 500 | 8.84E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 45 | 185 | 2.4E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.1490.310 | - | 611 | 667 | 4.0E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 902 | 1065 | 4.8E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 795 | 1.9E-161 | IPR032675 |
| SMART | SM00220 | serkin_6 | 807 | 1043 | 7.3E-4 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 189 | 210 | 8.451222 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 728 | 1045 | 11.326294 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 240 | 253 | 8.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 718 | 731 | 8.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13380.1 | BRI1-like 3. Similar to BRI, brassinosteroid receptor protein. | 0 |
| RefSeq | XP_011095659.1 | receptor-like protein kinase BRI1-like 3 [Sesamum indicum] | 0 |
| Q9LJF3 | Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana OX=3702 GN=BRL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9G704 | non-specific serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26407 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology