Basic Information
Locus ID:
jg20432
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 17638827 | 17642302 | + | jg20432 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 56,890.05 Da | 37.45 | 92.79 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 39 | 358 | 1.4E-73 | IPR000490 |
| Pfam | PF07983 | X8 domain | 376 | 447 | 6.2E-20 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 39 | 358 | 1.34E-76 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 38 | 365 | 4.9E-104 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 369 | 481 | 7.0E-12 | - |
| SMART | SM00768 | X8_cls | 375 | 460 | 3.4E-47 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 273 | 286 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_011096055.1 | glucan endo-1,3-beta-glucosidase 1 [Sesamum indicum] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A6I9UD95 | glucan endo-1,3-beta-glucosidase 1 OS=Sesamum indicum OX=4182 GN=LOC105175335 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology