halophFGD

Basic Information

Locus ID: jg20385

Species & Taxonomic ID: Avicennia marina & 1381980

Genome Assembly: GCA_013168755.1

Description: cellular response to molecule of fungal origin

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	17217745	17221206	-	jg20385

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.46	25,545.18 Da	37.58	103.63	0.02

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	71	141	3.56E-12	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	57	146	3.4E-21	-
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	101	123	-	IPR017441

Gene Ontology

Molecular Function:

GO:0005524 (ATP binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G23180.3	-
RefSeq	XP_052301577.1	cysteine-rich receptor-like protein kinase 29 isoform X47 [Populus trichocarpa]
Swiss-Prot	Q8GYA4	Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3
TrEMBL	A0A8M8V647	cysteine-rich receptor-like protein kinase 25 OS=Sesamum indicum OX=4182 GN=LOC105175425 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	1	jg20385
Amaranthaceae	Salicornia bigelovii	1	Sbi_jg49863
Casuarinaceae	Casuarina equisetifolia	1	Ceq07G0226
Poaceae	Zea mays	5	Zm00001eb072550_P001, Zm00001eb102860_P001 ... Zm00001eb234580_P001, Zm00001eb367710_P001, Zm00001eb384830_P001
Rhizophoraceae	Kandelia obovata	1	Maker00000298