Basic Information
Locus ID:
jg20251
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 15878630 | 15882143 | - | jg20251 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 103,217.17 Da | 33.29 | 108.63 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 780 | 851 | 1.7E-10 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 141 | 199 | 3.5E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 688 | 777 | 4.4E-10 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 63 | 9.8E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 681 | 913 | 9.41E-44 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 241 | 596 | 2.51E-58 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 308 | 4.08E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 771 | 933 | 1.2E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 264 | 617 | 4.7E-98 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 183 | 3.1E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 263 | 1.5E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 669 | 770 | 2.1E-23 | - |
| SMART | SM00369 | LRR_typ_2 | 139 | 162 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 187 | 212 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 548 | 571 | 66.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 236 | 260 | 98.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 500 | 523 | 60.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 285 | 309 | 230.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 573 | 595 | 7.342321 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 551 | 922 | 10.548924 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 692 | 715 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_011096363.1 | receptor-like protein kinase HSL1 [Sesamum indicum] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9U9W6 | receptor-like protein kinase HSL1 OS=Sesamum indicum OX=4182 GN=LOC105175577 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology