Basic Information
Locus ID:
jg20012
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 10932947 | 10935055 | + | jg20012 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 69,681.01 Da | 37.29 | 95.22 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 65 | 6.4E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 348 | 610 | 3.4E-37 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 71 | 129 | 9.1E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 44 | 212 | 9.45E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 348 | 612 | 9.02E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 419 | 631 | 6.0E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 314 | 418 | 1.2E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 87 | 239 | 4.3E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 86 | 9.5E-6 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 344 | 616 | 33.827621 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 350 | 372 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_011099906.1 | probable inactive receptor kinase At1g48480 [Sesamum indicum] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9UF21 | probable inactive receptor kinase At1g48480 OS=Sesamum indicum OX=4182 GN=LOC105178192 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology