Basic Information
Locus ID:
jg19602
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 6400441 | 6407918 | + | jg19602 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 46,719.29 Da | 49.75 | 72.12 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 161 | 325 | 1.2E-19 | IPR033389 |
| Pfam | PF02309 | AUX/IAA family | 329 | 421 | 1.3E-48 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 328 | 411 | 3.68E-15 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 327 | 424 | 2.9E-30 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 307 | 414 | 17.297157 | IPR000270 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.2 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | XP_011073641.1 | auxin-responsive protein IAA9-like [Sesamum indicum] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9SSX4 | Auxin-responsive protein OS=Sesamum indicum OX=4182 GN=LOC105158554 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology