Basic Information
Locus ID:
jg19344
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 3542404 | 3558775 | + | jg19344 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 38,951.94 Da | 42.46 | 70.53 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 156 | 290 | 7.2E-23 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 138 | 291 | 1.31E-29 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 119 | 291 | 1.6E-21 | IPR036378 |
| SMART | SM00554 | fasc_3 | 185 | 291 | 9.7E-26 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 144 | 288 | 19.540722 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 131 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 335 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 143 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 335 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 34 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03870.1 | FASCICLIN-like arabinoogalactan 9. fasciclin-like arabinogalactan-protein 9 (Fla9) | 0 |
| RefSeq | XP_012847451.1 | PREDICTED: fasciclin-like arabinogalactan protein 9 [Erythranthe guttata] | 0 |
| Q9ZWA8 | Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A022QM04 | FAS1 domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a012619mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology