Basic Information
Locus ID:
jg19223
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 2239289 | 2243973 | - | jg19223 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 53,952.98 Da | 43.16 | 109.15 | 0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 324 | 463 | 6.8E-19 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 134 | 289 | 2.0E-19 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 163 | 303 | 1.4E-14 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 309 | 465 | 1.9E-19 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 119 | 466 | 9.5E-101 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 103 | 466 | 1.9E-117 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_020550754.1 | vacuolar cation/proton exchanger 3 isoform X1 [Sesamum indicum] | 0 |
| Q8L783 | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana OX=3702 GN=CAX5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8M8V340 | Vacuolar cation/proton exchanger OS=Sesamum indicum OX=4182 GN=LOC105165536 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology