Basic Information
Locus ID:
jg19076
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
F-box family protein-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 1012645 | 1014228 | + | jg19076 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.59 | 35,295.81 Da | 37.00 | 97.15 | -0.04 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53790.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_011100568.1 | F-box protein At5g07610 [Sesamum indicum] | 0 |
| Q0WQM8 | F-box protein At1g53790 OS=Arabidopsis thaliana OX=3702 GN=At1g53790 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9UMP3 | F-box protein At5g07610 OS=Sesamum indicum OX=4182 GN=LOC105178733 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg19076, jg21476 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G20620.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10022358m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 3 | Sp3g08190.v2.2, Sp3g18620.v2.2, Sp3g18660.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g043170.2N, BniB01g043700.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq01G1238 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G1376 |