Basic Information
Locus ID:
jg18911
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ScioBoG_5375_HRSCAF_5398 | 4629 | 4889 | - | jg18911 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.84 | 9,624.79 Da | 74.14 | 90.70 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 63 | 3.6E-7 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53430.2 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_051149897.1 | probable LRR receptor-like serine/threonine-protein kinase At1g07650 isoform X2 [Andrographis paniculata] | 0 |
| C0LGG8 | Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana OX=3702 GN=At1g53430 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9SIC2 | probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Sesamum indicum OX=4182 GN=LOC105155325 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg18911 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8BG0002710 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30071340 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-21013 |