Basic Information
Locus ID:
jg18656
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr27 | 9802139 | 9802834 | - | jg18656 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 26,101.10 Da | 59.92 | 61.73 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 178 | 220 | 6.49716E-11 | - |
| Pfam | PF12678 | RING-H2 zinc finger domain | 175 | 220 | 9.0E-10 | IPR024766 |
| SUPERFAMILY | SSF57850 | RING/U-box | 177 | 225 | 3.06E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 144 | 224 | 1.0E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 178 | 219 | 0.0035 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 178 | 220 | 11.456568 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_011074236.1 | uncharacterized protein LOC105159002 [Sesamum indicum] | 0 |
| TrEMBL | A0A6I9SVE5 | uncharacterized protein LOC105159002 OS=Sesamum indicum OX=4182 GN=LOC105159002 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||