Basic Information
Locus ID:
jg18655
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
ubiquitin-protein transferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr27 | 9796758 | 9797471 | - | jg18655 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.66 | 26,974.56 Da | 56.49 | 65.40 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12678 | RING-H2 zinc finger domain | 176 | 221 | 1.5E-11 | IPR024766 |
| SUPERFAMILY | SSF57850 | RING/U-box | 168 | 227 | 1.01E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 140 | 224 | 5.0E-15 | IPR013083 |
| SMART | SM00184 | ring_2 | 179 | 220 | 0.0023 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 179 | 221 | 11.928664 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_011074236.1 | uncharacterized protein LOC105159002 [Sesamum indicum] | 0 |
| Q7TPV2 | E3 ubiquitin-protein ligase DZIP3 OS=Mus musculus OX=10090 GN=Dzip3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2G9GYU1 | RING-type domain-containing protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_16959 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||