Basic Information
Locus ID:
jg18402
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr27 | 3967257 | 3968546 | + | jg18402 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.46 | 20,872.71 Da | 51.23 | 74.87 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 135 | 178 | 3.1E-8 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 74 | 189 | 2.3E-8 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021984111.1 | cyclin-dependent kinase G-2-like [Helianthus annuus] | 0 |
| A2XUW1 | Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. indica OX=39946 GN=CDKG-2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A251RV09 | cyclin-dependent kinase OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr16g0497841 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg18402 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000036313 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G2392 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00029129 |
| Poaceae | Zea mays | 2 | Zm00001eb036430_P001, Zm00001eb160860_P001 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g28000 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-23391 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-18052 |