Basic Information
Locus ID:
jg18308
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
mitotic sister chromatid cohesion
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr27 | 3059540 | 3071166 | + | jg18308 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.98 | 82,619.47 Da | 50.06 | 79.41 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.30.30.140 | - | 567 | 614 | 8.9E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 448 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 683 | 728 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 655 | 670 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 448 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 619 | 670 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 619 | 633 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 685 | 701 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 477 | 499 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_011073330.1 | uncharacterized protein LOC105158314 [Sesamum indicum] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A6I9STC3 | uncharacterized protein LOC105158314 OS=Sesamum indicum OX=4182 GN=LOC105158314 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology