Basic Information
Locus ID:
jg18253
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
CUE domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr27 | 2512278 | 2521885 | + | jg18253 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.34 | 54,731.61 Da | 50.90 | 86.69 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06223 | PRTases_typeI | 50 | 110 | 1.04603E-8 | IPR000836 |
| CDD | cd14279 | CUE | 267 | 302 | 4.22423E-9 | - |
| Pfam | PF02845 | CUE domain | 269 | 302 | 8.8E-7 | IPR003892 |
| SUPERFAMILY | SSF46934 | UBA-like | 261 | 306 | 3.48E-7 | IPR009060 |
| SUPERFAMILY | SSF53271 | PRTase-like | 21 | 112 | 3.67E-22 | IPR029057 |
| Gene3D | G3DSA:3.40.50.2020 | - | 5 | 118 | 3.5E-40 | IPR029057 |
| ProSiteProfiles | PS51140 | CUE domain profile. | 264 | 307 | 12.654148 | IPR003892 |
| Coils | Coil | Coil | 429 | 460 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G32440.3 | Ubiquitin system component Cue protein. | 0 |
| RefSeq | XP_011073412.1 | uncharacterized protein LOC105158368 [Sesamum indicum] | 0 |
| Q42563 | Adenine phosphoribosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=APT2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9SSX1 | uncharacterized protein LOC105158368 OS=Sesamum indicum OX=4182 GN=LOC105158368 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology