Basic Information
Locus ID:
jg18075
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
phosphatase 2A 55 kDa regulatory subunit B
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr27 | 1048795 | 1056217 | - | jg18075 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 60,677.48 Da | 48.77 | 75.54 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 76 | 538 | 9.92E-34 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 113 | 543 | 3.2E-25 | IPR015943 |
| SMART | SM00320 | WD40_4 | 507 | 544 | 460.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 253 | 292 | 0.98 | IPR001680 |
| SMART | SM00320 | WD40_4 | 68 | 103 | 2.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 142 | 182 | 17.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 303 | 343 | 33.0 | IPR001680 |
| PIRSF | PIRSF037309 | PPA2_B55 | 16 | 43 | 75.0 | IPR000009 |
| PIRSF | PIRSF037309 | PPA2_B55 | 49 | 545 | 3.2E-185 | IPR000009 |
| ProSitePatterns | PS01024 | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 142 | 156 | - | IPR018067 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 129 | 157 | 2.8E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 514 | 543 | 2.8E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 349 | 376 | 2.8E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 158 | 186 | 2.8E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 82 | 102 | 2.8E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 431 | 457 | 2.8E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 405 | 430 | 2.8E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 292 | 319 | 2.8E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 264 | 291 | 2.8E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 320 | 348 | 2.8E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 377 | 404 | 2.8E-156 | IPR000009 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 511 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 479 | 499 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17720.1 | Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B | 0 |
| RefSeq | XP_009612715.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 [Nicotiana tomentosiformis] | 0 |
| Q39247 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Arabidopsis thaliana OX=3702 GN=PP2AB2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9H2W3 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Handroanthus impetiginosus OX=429701 GN=CDL12_15542 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology