Basic Information
Locus ID:
jg17971
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr27 | 273153 | 285107 | - | jg17971 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 201,969.13 Da | 49.27 | 78.65 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 380 | 652 | 3.02001E-132 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1520 | 1780 | 3.49006E-147 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 401 | 647 | 2.8E-34 | IPR002423 |
| Pfam | PF01363 | FYVE zinc finger | 32 | 100 | 9.3E-17 | IPR000306 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1559 | 1722 | 1.6E-32 | IPR002498 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 446 | 618 | 1.72E-42 | IPR027409 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 30 | 102 | 7.67E-20 | IPR011011 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1516 | 1780 | 5.17E-81 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 445 | 618 | 4.3E-53 | IPR027409 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 24 | 107 | 3.4E-21 | IPR013083 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1479 | 1640 | 2.8E-37 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1644 | 1781 | 7.6E-40 | - |
| SMART | SM00064 | fyve_4 | 27 | 102 | 1.6E-21 | IPR000306 |
| SMART | SM00330 | PIPK_2 | 1493 | 1781 | 6.4E-125 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1459 | 1780 | 58.544388 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 35 | 101 | 12.477851 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1287 | 1314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 187 | 209 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1287 | 1331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 368 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1190 | 1215 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1797 | 1816 | - | - |
| Coils | Coil | Coil | 1086 | 1113 | - | - |
| Coils | Coil | Coil | 186 | 206 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_011072684.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B isoform X1 [Sesamum indicum] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9SY92 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Sesamum indicum OX=4182 GN=LOC105157878 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology