Basic Information
Locus ID:
jg17959
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr27 | 191044 | 195798 | + | jg17959 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 75,860.00 Da | 35.17 | 86.27 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 409 | 673 | 1.89366E-85 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 63 | 2.0E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 405 | 670 | 7.6E-40 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 112 | 170 | 7.8E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 379 | 670 | 1.66E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 226 | 1.55E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 372 | 481 | 1.0E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 483 | 695 | 7.5E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 246 | 1.5E-44 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 403 | 673 | 33.233994 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 273 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14350.1 | STRUBBELIG-receptor family 7. | 0 |
| RefSeq | XP_051134873.1 | protein STRUBBELIG-RECEPTOR FAMILY 6-like isoform X1 [Andrographis paniculata] | 0 |
| Q9LUL4 | Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana OX=3702 GN=SRF7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9H8A1 | Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_13632 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology