Basic Information
Locus ID:
jg17777
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Cysteine-rich receptor-like protein kinase 42
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 12364311 | 12367170 | - | jg17777 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.11 | 71,736.02 Da | 40.54 | 85.36 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 325 | 588 | 2.52603E-91 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 50 | 132 | 2.6E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 179 | 235 | 7.3E-11 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 321 | 535 | 3.9E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 302 | 621 | 2.02E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 45 | 134 | 2.3E-15 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 395 | 598 | 1.0E-58 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 157 | 238 | 6.8E-14 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 279 | 394 | 1.0E-29 | - |
| SMART | SM00220 | serkin_6 | 319 | 603 | 7.2E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 319 | 603 | 35.905319 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 140 | 238 | 14.687482 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 33 | 134 | 15.266817 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 440 | 452 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 596 | 658 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 598 | 658 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 42. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_011098445.1 | cysteine-rich receptor-like protein kinase 42 [Sesamum indicum] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9UK64 | cysteine-rich receptor-like protein kinase 42 OS=Sesamum indicum OX=4182 GN=LOC105177109 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology