Basic Information
Locus ID:
jg17584
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 11076063 | 11079446 | - | jg17584 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.27 | 122,950.54 Da | 38.12 | 97.75 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 854 | 1122 | 1.10979E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 851 | 1049 | 1.7E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 159 | 217 | 3.5E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 256 | 277 | 0.23 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 77 | 1.0E-13 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 137 | 724 | 1.05E-59 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 831 | 1119 | 5.93E-73 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 498 | 764 | 4.9E-46 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 924 | 1124 | 4.4E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 353 | 477 | 5.0E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 811 | 923 | 2.9E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 105 | 2.7E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 112 | 352 | 1.9E-62 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 682 | 706 | 130.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 848 | 1126 | 3.5E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 658 | 681 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 610 | 634 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 156 | 179 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 301 | 325 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 180 | 204 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 228 | 252 | 91.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 848 | 1122 | 38.166759 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 854 | 876 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 968 | 980 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 747 | 779 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 747 | 770 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.1 | receptor-like protein kinase 2. | 0 |
| RefSeq | XP_011098750.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Sesamum indicum] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9UIT9 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Sesamum indicum OX=4182 GN=LOC105177329 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology