Basic Information
Locus ID:
jg17573
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 10962977 | 10980246 | - | jg17573 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.05 | 157,580.42 Da | 41.61 | 84.40 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12819 | Malectin-like domain | 35 | 265 | 5.6E-8 | IPR024788 |
| Pfam | PF00069 | Protein kinase domain | 452 | 513 | 4.6E-9 | IPR000719 |
| Pfam | PF12819 | Malectin-like domain | 799 | 1120 | 3.8E-30 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1260 | 1399 | 4.22E-8 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 372 | 550 | 7.69E-30 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1256 | 1412 | 1.0E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 448 | 560 | 9.1E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 349 | 433 | 6.9E-15 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 235 | 348 | 9.5E-6 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 990 | 1150 | 1.4E-16 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 796 | 962 | 4.4E-22 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 32 | 198 | 1.2E-17 | - |
| SMART | SM00220 | serkin_6 | 387 | 555 | 3.4E-5 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 393 | 415 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1139 | 1216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1148 | 1166 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_011099165.1 | receptor-like protein kinase FERONIA [Sesamum indicum] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8Z8W8 | Uncharacterized protein OS=Salvia splendens OX=180675 GN=SASPL_142272 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||