Basic Information
Locus ID:
jg17572
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 10956812 | 10960411 | - | jg17572 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 78,753.93 Da | 46.83 | 77.09 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12819 | Malectin-like domain | 39 | 409 | 6.2E-29 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 542 | 687 | 1.28E-12 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 521 | 700 | 1.3E-17 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 36 | 202 | 5.2E-23 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 231 | 412 | 1.6E-15 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 458 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 483 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_011099165.1 | receptor-like protein kinase FERONIA [Sesamum indicum] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9UG56 | receptor-like protein kinase FERONIA OS=Sesamum indicum OX=4182 GN=LOC105177639 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||