Basic Information
Locus ID:
jg17533
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
NIK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 10684712 | 10687591 | + | jg17533 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.90 | 68,538.19 Da | 39.39 | 95.97 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 307 | 571 | 2.9E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 72 | 3.0E-12 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 124 | 146 | 0.016 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 282 | 576 | 9.86E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 197 | 4.54E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 214 | 6.0E-54 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 275 | 382 | 1.5E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 383 | 595 | 5.0E-63 | - |
| SMART | SM00220 | serkin_6 | 306 | 575 | 6.4E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 306 | 585 | 35.650906 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 124 | 147 | 7.427029 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 312 | 334 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 425 | 437 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_042021764.1 | protein NSP-INTERACTING KINASE 1-like isoform X1 [Salvia splendens] | 0 |
| Q9LFS4 | Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9GAY0 | Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25039 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology