Basic Information
Locus ID:
jg17325
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 6627220 | 6632483 | + | jg17325 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 109,912.54 Da | 42.64 | 94.16 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 581 | 867 | 4.3E-41 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 68 | 5.1E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 490 | 4.76E-45 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 574 | 870 | 4.51E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 570 | 656 | 2.9E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 657 | 885 | 8.8E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 126 | 1.9E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 172 | 515 | 8.1E-75 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 230 | 252 | 7.226811 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 579 | 876 | 36.824028 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 585 | 607 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 702 | 714 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_011073656.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Sesamum indicum] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9H243 | Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_15802 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology