Basic Information
Locus ID:
jg17107
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 2101263 | 2104678 | - | jg17107 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 85,972.76 Da | 35.35 | 90.33 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 116 | 155 | 8.2E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 580 | 710 | 5.1E-13 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 335 | 369 | 2.9E-5 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 71 | 5.0E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 581 | 730 | 6.83E-25 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 55 | 439 | 1.7E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 330 | 2.0E-82 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 332 | 456 | 5.2E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 559 | 729 | 5.7E-31 | - |
| SMART | SM00220 | serkin_6 | 500 | 716 | 0.0051 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 96 | 118 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 119 | 142 | 2.6E-5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 143 | 167 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 394 | 418 | 91.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 217 | 250.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 121 | 142 | 7.588744 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 335 | 716 | 10.817471 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 478 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 755 | 789 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 474 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_011099938.1 | receptor protein kinase TMK1 [Sesamum indicum] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9ULD7 | receptor protein kinase TMK1 OS=Sesamum indicum OX=4182 GN=LOC105178215 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology