Basic Information
Locus ID:
jg17073
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Receptor-like cytosolic serine threonine-protein kinase RBK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 1659048 | 1662397 | - | jg17073 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 55,765.18 Da | 48.92 | 78.79 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 186 | 391 | 4.4E-42 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 160 | 450 | 1.5E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 157 | 260 | 1.2E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 262 | 472 | 2.4E-57 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 183 | 469 | 34.053768 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 304 | 316 | - | IPR008266 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 189 | 212 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 54 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 56 | - | - |
| Coils | Coil | Coil | 33 | 53 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65530.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_011099971.1 | receptor-like cytosolic serine/threonine-protein kinase RBK1 [Sesamum indicum] | 0 |
| Q8H1D6 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana OX=3702 GN=RBK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9G8Q2 | Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26132 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology