Basic Information
Locus ID:
jg16992
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
FBD
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 777012 | 778138 | + | jg16992 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 38,994.86 Da | 46.99 | 80.99 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 28 | 65 | 1.7E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 136 | 310 | 1.1E-14 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 26 | 73 | 7.46E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 17 | 116 | 6.1E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 135 | 340 | 3.1E-13 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 26 | 74 | 9.126548 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00315.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_011090636.1 | putative F-box/LRR-repeat protein At5g54820 [Sesamum indicum] | 0 |
| Q3EAE5 | Putative F-box/FBD/LRR-repeat protein At4g00315 OS=Arabidopsis thaliana OX=3702 GN=At4g00315 PE=4 SV=1 | 0 | |
| TrEMBL | A0A6I9TZN3 | putative F-box/LRR-repeat protein At5g54820 OS=Sesamum indicum OX=4182 GN=LOC105171277 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology