Basic Information
Locus ID:
jg16990
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 762681 | 763007 | + | jg16990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.27 | 12,408.01 Da | 53.42 | 56.94 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 27 | 63 | 1.6E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 24 | 71 | 1.31E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 12 | 100 | 7.4E-8 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 24 | 72 | 9.179537 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G42770.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_011090636.1 | putative F-box/LRR-repeat protein At5g54820 [Sesamum indicum] | 0 |
| Q9M190 | Putative F-box/LRR-repeat protein At3g42770 OS=Arabidopsis thaliana OX=3702 GN=At3g42770 PE=4 SV=1 | 0 | |
| TrEMBL | A0A6I9TZN3 | putative F-box/LRR-repeat protein At5g54820 OS=Sesamum indicum OX=4182 GN=LOC105171277 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology