Basic Information
Locus ID:
jg16942
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
GPI-GlcNAc transferase complex, PIG-H component
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr17 | 335623 | 339051 | - | jg16942 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 32,115.99 Da | 36.13 | 116.27 | 0.42 |
Protein Domain:
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35530.1 | phosphatidylinositolglycan-related. | 0 |
| RefSeq | XP_020554994.1 | uncharacterized protein LOC105178658 isoform X1 [Sesamum indicum] | 0 |
| TrEMBL | A0A2G9HE51 | GPI-GlcNAc transferase complex, PIG-H component OS=Handroanthus impetiginosus OX=429701 GN=CDL12_11553 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg16942 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_8257 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah027287 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g135710 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg12661, Sbi_jg53263 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg8645 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00010365 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl33600, Sgl39151 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000000775, gene:ENSEOMG00000002842 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.6AG0023820 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30212230 |
| Apiaceae | Apium graveolens | 1 | Ag3G01774 |
| Arecaceae | Cocos nucifera | 1 | COCNU_16G005970 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103721509 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_05.465.V1.1, AsparagusV1_07.630.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri14G12148 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G35530.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10026286m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g33310.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g087590.2N, BniB05g002890.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G0051 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g17170 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g31930 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.2881 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00003915, Pov_00020833 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb2G11603, Lb8G36054 |
| Poaceae | Echinochloa crus-galli | 5 | AH05.1099, BH02.550, BH05.1152, CH02.614, CH05.1295 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_1BG0059460, gene-QOZ80_5AG0403510 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0025880.1, HORVU.MOREX.r3.3HG0234720.2 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_050028 |
| Poaceae | Oryza coarctata | 4 | Oco01G002520, Oco02G002580, Oco09G003150, Oco10G003130 |
| Poaceae | Oryza sativa | 2 | LOC_Os01g07212.1, LOC_Os05g07260.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_03G053700, gene-BS78_09G065100 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0501706, Pt_Chr0501754 |
| Poaceae | Sporobolus alterniflorus | 8 | Chr01G011790, Chr02G019290, Chr03G004820, Chr05G010290 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel1E01G207900, Tel3E01G169300 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC1AG014560, gene_TRIDC1BG019470 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS1A02G111600.1, TraesCS1B02G131800.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb123330_P001, Zm00001eb345970_P003 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-6881 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g10010, Zma_g26493, Zma_g27760 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG06.1777 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g34150 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-4150, nbisL1-mrna-6244 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-17465 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-4093 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000016l.411 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00016367 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-7584 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-13528 |
| Salicaceae | Populus euphratica | 3 | populus_peu04754, populus_peu12908, populus_peu12917 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132622610, gene-LOC132623824 |
| Solanaceae | Solanum chilense | 1 | SOLCI007268200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107009240 |
| Tamaricaceae | Tamarix chinensis | 1 | TC10G1730 |