Basic Information
Locus ID:
jg16267
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr31 | 1653930 | 1657432 | + | jg16267 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 23,946.34 Da | 31.36 | 96.98 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 108 | 179 | 8.6E-11 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 91 | 185 | 2.16E-17 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 73 | 182 | 1.3E-24 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 106 | 215 | 11.071882 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60900.1 | receptor-like protein kinase 1. Encodes a receptor-like protein kinase. | 0 |
| RefSeq | XP_034687654.1 | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 [Vitis riparia] | 0 |
| Q25AG2 | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 OS=Oryza sativa subsp. indica OX=39946 GN=LECRK4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2Z7CBG0 | Receptor-like serine/threonine-protein kinase OS=Dorcoceras hygrometricum OX=472368 GN=F511_26443 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg16267 |
| Casuarinaceae | Casuarina glauca | 6 | Cgl05G2152, Cgl05G2165, Cgl05G2170, Cgl05G2172, Cgl05G2198 ... |