Basic Information
Locus ID:
jg1626
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 11632030 | 11634881 | - | jg1626 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 53,481.53 Da | 44.11 | 83.61 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 25 | 344 | 9.5E-79 | IPR000490 |
| Pfam | PF07983 | X8 domain | 360 | 431 | 3.3E-19 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 25 | 345 | 6.18E-79 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 24 | 352 | 1.5E-108 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 354 | 453 | 3.6E-10 | - |
| SMART | SM00768 | X8_cls | 359 | 444 | 4.3E-47 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 259 | 272 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_011087532.1 | glucan endo-1,3-beta-glucosidase 4-like [Sesamum indicum] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2G9HML4 | Glucan endo-1,3-beta-D-glucosidase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_08553 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology