Basic Information
Locus ID:
jg16243
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr31 | 1414407 | 1421001 | - | jg16243 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 136,242.41 Da | 41.54 | 78.91 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 968 | 1225 | 1.20121E-106 | - |
| CDD | cd06410 | PB1_UP2 | 199 | 295 | 1.09116E-45 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 963 | 1225 | 2.2E-62 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 212 | 294 | 3.3E-19 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 211 | 300 | 1.91E-20 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 952 | 1224 | 6.32E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 955 | 1048 | 5.1E-24 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 214 | 296 | 9.2E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1049 | 1245 | 2.5E-54 | - |
| SMART | SM00666 | PB1_new | 210 | 297 | 3.3E-32 | IPR000270 |
| SMART | SM00220 | serkin_6 | 962 | 1231 | 7.9E-56 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 962 | 1226 | 40.71088 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1087 | 1099 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 968 | 993 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1152 | 1174 | 2.6E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1081 | 1099 | 2.6E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1044 | 1057 | 2.6E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1196 | 1218 | 2.6E-13 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_011083117.1 | uncharacterized protein LOC105165714 [Sesamum indicum] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9HZ16 | Tyrosine kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_04518 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology