Basic Information
Locus ID:
jg16103
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr31 | 399054 | 400250 | - | jg16103 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.39 | 43,777.93 Da | 35.97 | 104.05 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 69 | 2.9E-7 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 150 | 169 | 0.12 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 193 | 206 | 0.54 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 371 | 4.93E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 265 | 2.3E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 266 | 371 | 5.1E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 193 | 7.9E-34 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 149 | 171 | 7.026593 | IPR001611 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_011082523.1 | probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 [Sesamum indicum] | 0 |
| TrEMBL | A0A6I9TD22 | probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 OS=Sesamum indicum OX=4182 GN=LOC105165265 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology