Basic Information
Locus ID:
jg15580
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the formin-like family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 11362765 | 11378398 | + | jg15580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 93,631.01 Da | 59.71 | 72.99 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF101447 | Formin homology 2 domain (FH2 domain) | 610 | 733 | 6.54E-10 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 770 | 861 | 5.26E-6 | - |
| Gene3D | G3DSA:2.60.40.1110 | - | 22 | 63 | 9.0E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 754 | 866 | 9.4E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.58.2220 | Formin, FH2 domain | 643 | 753 | 5.1E-14 | IPR042201 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 590 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 163 | 183 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 556 | 582 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 183 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 510 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58160.1 | actin binding. | 0 |
| RefSeq | XP_011083984.1 | formin-like protein 13 isoform X2 [Sesamum indicum] | 0 |
| Q9LVN1 | Formin-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=FH13 PE=2 SV=3 | 0 | |
| TrEMBL | A0A2G9G1N9 | Formin-like protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_28290 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology