Basic Information
Locus ID:
jg15255
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 4610869 | 4612824 | - | jg15255 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.68 | 9,867.08 Da | 32.22 | 96.33 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_020553583.1 | F-box protein At4g19940-like [Sesamum indicum] | 0 |
| TrEMBL | A0A8M8VAS4 | F-box protein At4g19940-like OS=Sesamum indicum OX=4182 GN=LOC105173870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg15083, jg15255, jg3735 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_17879 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah034745 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g030430 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg21164, Sbi_jg22640 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg16526 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00016279 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl62317, Sgl67167 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.1BG0021110 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp4g22180.v2.2, Sp5g30880.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB06g048830.2N |
| Plantaginaceae | Plantago ovata | 5 | Pov_00001674, Pov_00005518, Pov_00005519, Pov_00005520 ... |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG10.785, evm.TU.LG17.784 |
| Salicaceae | Populus euphratica | 1 | populus_peu19120 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132612212 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107029230 |