halophFGD

Basic Information

Locus ID: jg1489

Species & Taxonomic ID: Avicennia marina & 1381980

Genome Assembly: GCA_013168755.1

Short Name: HDH

Description: histidinol dehydrogenase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr9	10247388	10267122	+	jg1489

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.98	141,217.30 Da	46.82	101.25	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd06572	Histidinol_dh	877	1267	0.0	IPR012131
Pfam	PF00069	Protein kinase domain	483	752	8.3E-19	IPR000719
Pfam	PF13855	Leucine rich repeat	247	306	1.5E-6	IPR001611
Pfam	PF13855	Leucine rich repeat	154	214	6.4E-11	IPR001611
Pfam	PF00815	Histidinol dehydrogenase	869	1275	5.4E-158	IPR012131
SUPERFAMILY	SSF53720	ALDH-like	875	1275	1.96E-70	IPR016161
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	464	755	6.74E-41	IPR011009
SUPERFAMILY	SSF52058	L domain-like	53	358	3.37E-49	-
Gene3D	G3DSA:1.20.5.1300	-	946	1275	1.0E-142	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	245	361	2.2E-17	IPR032675
Gene3D	G3DSA:3.40.50.1980	Nitrogenase molybdenum iron protein domain	880	1236	1.0E-142	-
Gene3D	G3DSA:3.40.50.1980	Nitrogenase molybdenum iron protein domain	1083	1226	1.0E-142	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	449	564	6.3E-20	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	565	774	2.1E-22	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	29	244	2.3E-47	IPR032675
SMART	SM00369	LRR_typ_2	201	223	130.0	IPR003591
SMART	SM00369	LRR_typ_2	293	318	190.0	IPR003591
SMART	SM00369	LRR_typ_2	129	153	43.0	IPR003591
SMART	SM00369	LRR_typ_2	177	200	180.0	IPR003591
SMART	SM00369	LRR_typ_2	224	251	11.0	IPR003591
TIGRFAM	TIGR00069	hisD: histidinol dehydrogenase	881	1274	1.0E-147	IPR012131
ProSiteProfiles	PS50011	Protein kinase domain profile.	482	759	24.230635	IPR000719
ProSitePatterns	PS00611	Histidinol dehydrogenase signature.	1077	1109	-	IPR001692
PRINTS	PR00083	Histidinol dehydrogenase signature	1209	1227	7.3E-96	IPR012131
PRINTS	PR00083	Histidinol dehydrogenase signature	980	1006	7.3E-96	IPR012131
PRINTS	PR00083	Histidinol dehydrogenase signature	1045	1070	7.3E-96	IPR012131
PRINTS	PR00083	Histidinol dehydrogenase signature	1168	1193	7.3E-96	IPR012131
PRINTS	PR00083	Histidinol dehydrogenase signature	1077	1098	7.3E-96	IPR012131
PRINTS	PR00083	Histidinol dehydrogenase signature	881	905	7.3E-96	IPR012131
PRINTS	PR00083	Histidinol dehydrogenase signature	1099	1118	7.3E-96	IPR012131
PRINTS	PR00083	Histidinol dehydrogenase signature	1015	1041	7.3E-96	IPR012131
Hamap	MF_01024	Histidinol dehydrogenase [hisD].	856	1276	64.048943	IPR012131

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding) GO:0016491 (oxidoreductase activity) GO:0016616 (oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor) GO:0046872 (metal ion binding) GO:0051287 (NAD binding)

KEGG Pathway

KO Term:

K00013 (histidinol dehydrogenase [EC:1.1.1.23])

Pathway:

ko00340 (Histidine metabolism) map00340 (Histidine metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko01230 (Biosynthesis of amino acids) map01230 (Biosynthesis of amino acids)

Module:

M00026 (Histidine biosynthesis, PRPP => histidine)

Reaction:

R01158 (L-Histidinol + 2 NAD+ + H2O <=> L-Histidine + 2 NADH + 2 H+) R01163 (L-Histidinal + H2O + NAD+ <=> L-Histidine + NADH + H+) R03012 (L-Histidinol + NAD+ <=> L-Histidinal + NADH + H+)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G63890.2	histidinol dehydrogenase. Encodes histidinol dehydrogenase. Up-regulated in response to UV-B.
RefSeq	XP_011078709.1	probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Sesamum indicum]
Swiss-Prot	P24226	Histidinol dehydrogenase, chloroplastic OS=Brassica oleracea var. capitata OX=3716 GN=HDH PE=1 SV=1
TrEMBL	A0A2G9GMU7	Serine/threonine protein kinase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_20901 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	1	jg1489
Aizoaceae	Mesembryanthemum crystallinum	1	gene_23447
Amaranthaceae	Atriplex hortensis	1	Ah004930
Amaranthaceae	Beta vulgaris	1	BVRB_1g001220
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg29463, Sbi_jg3711
Amaranthaceae	Salicornia europaea	1	Seu_jg6267
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00000749
Amaranthaceae	Suaeda glauca	2	Sgl10721, Sgl16076
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000011615, gene:ENSEOMG00000025632 ... gene:ENSEOMG00000040363
Amaranthaceae	Chenopodium quinoa	3	CQ.Regalona.r1.4AG0000830, CQ.Regalona.r1.4BG0000100 ... CQ.Regalona.r1.4BG0001000
Anacardiaceae	Pistacia vera	2	pistato.v30077100, pistato.v30077300
Apiaceae	Apium graveolens	1	Ag7G01322
Arecaceae	Cocos nucifera	1	COCNU_14G008930
Arecaceae	Phoenix dactylifera	1	gene-LOC103710491
Asparagaceae	Asparagus officinalis	2	AsparagusV1_01.3250.V1.1, AsparagusV1_07.3475.V1.1
Asteraceae	Flaveria trinervia	2	Ftri17G05373, Ftri6G33859
Brassicaceae	Arabidopsis thaliana	1	AT5G63890.2
Brassicaceae	Eutrema salsugineum	1	Thhalv10004035m.g.v1.0
Brassicaceae	Schrenkiella parvula	1	Sp2g26950.v2.2
Brassicaceae	Brassica nigra	2	BniB06g012140.2N, BniB07g042570.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq07G1974
Casuarinaceae	Casuarina glauca	3	Cgl07G2112, Cgl07G2121, Cgl07G2169
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno17g03800
Dunaliellaceae	Dunaliella salina	1	Dusal.0217s00001.v1.0
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate06g06910
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG12.481
Plantaginaceae	Plantago ovata	2	Pov_00014733, Pov_00037450
Plumbaginaceae	Limonium bicolor	1	Lb5G27597
Poaceae	Echinochloa crus-galli	2	AH01.123, BH03.3863
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_3AG0213550, gene-QOZ80_3BG0258670
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.2HG0165510.1
Poaceae	Lolium multiflorum	1	gene-QYE76_043713
Poaceae	Oryza coarctata	2	Oco01G005940, Oco02G006020
Poaceae	Oryza sativa	1	LOC_Os01g13190.1
Poaceae	Paspalum vaginatum	2	gene-BS78_01G058900, gene-BS78_01G219800
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0302857, Pt_Chr0302926
Poaceae	Sporobolus alterniflorus	8	Chr01G003430, Chr04G030010, Chr0G012730, Chr0G020610 ... Chr0G025040, Chr0G025290, Chr12G035290, Chr12G035570
Poaceae	Thinopyrum elongatum	1	Tel2E01G519300
Poaceae	Triticum dicoccoides	2	gene_TRIDC2AG042300, gene_TRIDC2BG045390
Poaceae	Triticum aestivum	3	TraesCS2A02G292100.1, TraesCS2B02G308600.3 ... TraesCS2D02G290100.2
Poaceae	Zea mays	1	Zm00001eb059830_P005
Poaceae	Zoysia japonica	3	nbis-gene-15264, nbis-gene-15266, nbis-gene-16395
Poaceae	Zoysia macrostachya	1	Zma_g2629
Portulacaceae	Portulaca oleracea	2	evm.TU.LG04.2014, evm.TU.LG06.311
Posidoniaceae	Posidonia oceanica	1	gene.Posoc10g05480
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_14_RagTag.990
Rhizophoraceae	Carallia pectinifolia	1	nbisL1-mrna-16835
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-13064
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-17284
Rhizophoraceae	Kandelia candel	1	evm.TU.utg000025l.142
Rhizophoraceae	Kandelia obovata	1	Maker00012275
Rhizophoraceae	Rhizophora apiculata	1	nbisL1-mrna-8619
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-22990
Salicaceae	Populus euphratica	2	populus_peu00070, populus_peu17142
Solanaceae	Lycium barbarum	1	gene-LOC132623324
Solanaceae	Solanum chilense	1	SOLCI003514500
Solanaceae	Solanum pennellii	1	gene-LOC107011402
Tamaricaceae	Reaumuria soongarica	2	STRG.26483_chr11_+, STRG.8703_chr06_+
Tamaricaceae	Tamarix chinensis	1	TC09G2436
Zosteraceae	Zostera marina	1	Zosma02g17900.v3.1