Basic Information
Locus ID:
jg14776
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 829486 | 834197 | + | jg14776 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 59,554.21 Da | 38.17 | 85.51 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 54 | 312 | 7.21085E-133 | - |
| CDD | cd00051 | EFh | 432 | 494 | 1.30187E-18 | IPR002048 |
| Pfam | PF13202 | EF hand | 361 | 383 | 0.0051 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 431 | 494 | 6.9E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 57 | 313 | 1.7E-72 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 342 | 520 | 6.4E-41 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 39 | 337 | 4.72E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 141 | 321 | 2.1E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 322 | 497 | 1.3E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 56 | 140 | 6.8E-26 | - |
| SMART | SM00054 | efh_1 | 432 | 460 | 2.0E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 468 | 496 | 3.8E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 396 | 424 | 43.0 | IPR002048 |
| SMART | SM00220 | serkin_6 | 55 | 313 | 5.7E-93 | IPR000719 |
| SMART | SM00054 | efh_1 | 360 | 388 | 0.0013 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 356 | 391 | 12.839682 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 55 | 313 | 45.516441 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 428 | 463 | 14.290241 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 464 | 499 | 14.513405 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 175 | 187 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 477 | 489 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 61 | 84 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 369 | 381 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 441 | 453 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 35 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_020553260.1 | calcium-dependent protein kinase 13 isoform X1 [Sesamum indicum] | 0 |
| Q8W4I7 | Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=CPK13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8M8V9U3 | calcium-dependent protein kinase 13 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105174573 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology