Basic Information
Locus ID:
jg14608
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr23 | 11719286 | 11727010 | + | jg14608 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.59 | 145,410.59 Da | 44.93 | 73.74 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 729 | 815 | 8.87308E-28 | - |
| Pfam | PF00855 | PWWP domain | 729 | 814 | 3.9E-16 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 728 | 832 | 5.36E-25 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 722 | 822 | 1.7E-22 | - |
| SMART | SM00293 | PWWP_4 | 729 | 790 | 6.1E-9 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 731 | 792 | 14.014058 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 502 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 929 | 1003 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1178 | 1210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 983 | 998 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 945 | 975 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 506 | 527 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_011077037.1 | uncharacterized protein LOC105161140 [Sesamum indicum] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9T0R7 | uncharacterized protein LOC105161140 OS=Sesamum indicum OX=4182 GN=LOC105161140 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology