Basic Information
Locus ID:
jg14550
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Pentatricopeptide repeat-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr23 | 11119750 | 11125138 | + | jg14550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.30 | 81,110.84 Da | 39.31 | 90.63 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 459 | 728 | 1.4836E-84 | - |
| Pfam | PF12819 | Malectin-like domain | 34 | 251 | 2.6E-8 | IPR024788 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 457 | 726 | 3.5E-45 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 275 | 342 | 2.3E-5 | IPR021720 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 430 | 727 | 3.89E-77 | IPR011009 |
| Gene3D | G3DSA:2.60.120.430 | - | 31 | 200 | 7.4E-22 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 249 | 370 | 1.6E-8 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 437 | 531 | 2.1E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 532 | 731 | 5.0E-57 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 453 | 731 | 38.166759 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 575 | 587 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 459 | 484 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17220.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_051130821.1 | putative receptor-like protein kinase At5g39000 isoform X2 [Andrographis paniculata] | 0 |
| Q9SII6 | Probable serine/threonine-protein kinase PIX13 OS=Arabidopsis thaliana OX=3702 GN=PIX13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A830CMI2 | Probable galacturonosyltransferase 3 OS=Phtheirospermum japonicum OX=374723 GN=PHJA_002328800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||