Basic Information
Locus ID:
jg14247
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr23 | 4550336 | 4555697 | + | jg14247 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 72,266.80 Da | 49.26 | 86.42 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 47 | 89 | 9.9E-12 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 376 | 525 | 5.3E-18 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 537 | 621 | 3.6E-5 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 357 | 622 | 5.76E-41 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 179 | 5.83E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 45 | 204 | 1.1E-30 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 533 | 627 | 1.6E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 455 | 532 | 4.8E-13 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 348 | 454 | 2.6E-17 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 372 | 626 | 17.714863 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 306 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 0 |
| RefSeq | XP_011076664.1 | probable inactive receptor-like protein kinase At3g56050 [Sesamum indicum] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9T3N3 | probable inactive receptor-like protein kinase At3g56050 OS=Sesamum indicum OX=4182 GN=LOC105160864 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology