Basic Information
Locus ID:
jg14119
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr23 | 2732478 | 2736914 | - | jg14119 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.03 | 112,431.68 Da | 32.40 | 99.98 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 84 | 5.3E-5 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 306 | 319 | 1.2 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 283 | 300 | 67.0 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 722 | 992 | 1.9E-47 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 544 | 565 | 0.4 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 374 | 390 | 0.96 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 111 | 125 | 2.0 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 425 | 483 | 1.1E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 722 | 994 | 1.75E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 305 | 613 | 1.7E-59 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 72 | 393 | 4.42E-64 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 324 | 2.0E-73 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 698 | 797 | 2.6E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 325 | 643 | 8.6E-88 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 798 | 1004 | 8.2E-59 | - |
| SMART | SM00369 | LRR_typ_2 | 566 | 589 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 447 | 471 | 83.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 207 | 231 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 351 | 375 | 32.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 719 | 998 | 1.1E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 303 | 326 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 327 | 349 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 135 | 159 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 255 | 279 | 300.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 719 | 998 | 38.477707 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 845 | 857 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 725 | 748 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1013 | 1031 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 994 | 1031 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011076386.1 | leucine-rich repeat receptor-like protein kinase TDR [Sesamum indicum] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9T0P6 | leucine-rich repeat receptor-like protein kinase TDR OS=Sesamum indicum OX=4182 GN=LOC105160618 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology