Basic Information
Locus ID:
jg14082
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr23 | 2364461 | 2368269 | - | jg14082 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.67 | 79,556.87 Da | 42.89 | 93.83 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 62 | 3.6E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 408 | 564 | 3.2E-21 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 138 | 197 | 4.4E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 23 | 232 | 2.93E-41 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 388 | 637 | 1.4E-37 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 561 | 644 | 2.7E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 174 | 7.0E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 175 | 244 | 2.7E-14 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 379 | 483 | 8.6E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 485 | 560 | 4.8E-7 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 405 | 734 | 18.478098 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 278 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011076309.1 | probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Sesamum indicum] | 0 |
| C0LGG7 | Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana OX=3702 GN=At1g53420 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6I9SZ74 | probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Sesamum indicum OX=4182 GN=LOC105160570 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology