Basic Information
Locus ID:
jg13948
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr23 | 1288018 | 1290722 | - | jg13948 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 76,613.82 Da | 43.64 | 77.91 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 40 | 173 | 1.58947E-72 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 41 | 152 | 2.7E-8 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 155 | 663 | 2.2E-236 | IPR001404 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 34 | 184 | 5.09E-50 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 234 | 489 | 4.55E-110 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 513 | 635 | 4.32E-39 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 402 | 488 | 1.1E-41 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 233 | 401 | 1.7E-87 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 489 | 640 | 1.2E-66 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 21 | 199 | 1.0E-65 | IPR036890 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 15 | 669 | 1.1E-233 | IPR001404 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 141 | 158 | 7.2E-56 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 89 | 111 | 7.2E-56 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 46 | 63 | 7.2E-56 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 64 | 81 | 7.2E-56 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 159 | 177 | 7.2E-56 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 1 | 636 | 23.200758 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 186 | 217 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 188 | 209 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 644 | 669 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 642 | 669 | - | - |
| Coils | Coil | Coil | 198 | 225 | - | - |
| Coils | Coil | Coil | 488 | 514 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_011076104.1 | heat shock protein 83 [Sesamum indicum] | 0 |
| P51819 | Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9T6L3 | heat shock protein 83 OS=Sesamum indicum OX=4182 GN=LOC105160433 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology