halophFGD

Basic Information

Locus ID: jg13810

Species & Taxonomic ID: Avicennia marina & 1381980

Genome Assembly: GCA_013168755.1

Short Name: OBF5

Description: Transcription factor

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr23	321962	330101	+	jg13810

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.01	73,129.69 Da	63.84	76.68	-0.51

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd14708	bZIP_HBP1b-like	44	96	4.13335E-25	-
Pfam	PF14144	Seed dormancy control	136	165	9.0E-10	IPR025422
Pfam	PF00170	bZIP transcription factor	43	85	9.3E-7	IPR004827
SUPERFAMILY	SSF57959	Leucine zipper domain	44	87	9.38E-7	-
Gene3D	G3DSA:1.20.5.170	-	43	94	2.8E-10	-
SMART	SM00338	brlzneu	40	103	2.4E-8	IPR004827
ProSiteProfiles	PS51806	DOG1 domain profile.	59	289	25.167622	IPR025422
ProSiteProfiles	PS50217	Basic-leucine zipper (bZIP) domain profile.	42	86	9.461466	IPR004827
ProSitePatterns	PS00036	Basic-leucine zipper (bZIP) domain signature.	47	62	-	IPR004827
MobiDBLite	mobidb-lite	consensus disorder prediction	1	44	-	-
Coils	Coil	Coil	63	90	-	-

Gene Ontology

Biological Process:

GO:0006351 (DNA-templated transcription) GO:0006355 (regulation of DNA-templated transcription)

Molecular Function:

GO:0003700 (DNA-binding transcription factor activity) GO:0043565 (sequence-specific DNA binding)

KEGG Pathway

KO Term:

K14431 (transcription factor TGA)

Pathway:

ko04075 (Plant hormone signal transduction) map04075 (Plant hormone signal transduction)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G06950.1	bZIP transcription factor family protein. Transcription factor of the B-ZIP family that has high affinity for C-box motifs. Interacts with NPR1 and may regulate PR gene expression. Phosphorylated by a CK2-like protein in vitro. Phosphorylation is enhanced by salicylic acid treatment.
RefSeq	XP_011075853.1	transcription factor TGA2.2 [Sesamum indicum]
Swiss-Prot	Q6IVC2	Transcription factor TGAL1 OS=Oryza sativa subsp. japonica OX=39947 GN=TGAL1 PE=1 SV=2
TrEMBL	A0A8X8YLD0	Uncharacterized protein OS=Salvia splendens OX=180675 GN=SASPL_106672 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	12	jg10115, jg13810, jg14130, jg17275, jg17276, jg17277, jg2439 ... jg17278, jg17279, jg17280, jg17281, jg2440
Aizoaceae	Mesembryanthemum crystallinum	5	gene_14413, gene_14414, gene_14893, gene_1984, gene_9907
Amaranthaceae	Atriplex hortensis	7	Ah004028, Ah004029, Ah004033, Ah004034, Ah030906, Ah033291 ... Ah034746
Amaranthaceae	Beta vulgaris	3	BVRB_2g030420, BVRB_5g104470, BVRB_5g104480
Amaranthaceae	Salicornia bigelovii	7	Sbi_jg16415, Sbi_jg24176, Sbi_jg24177, Sbi_jg27434 ... Sbi_jg33167, Sbi_jg60921, Sbi_jg8016
Amaranthaceae	Salicornia europaea	3	Seu_jg12024, Seu_jg22737, Seu_jg7899
Amaranthaceae	Suaeda aralocaspica	4	GOSA_00008079, GOSA_00010768, GOSA_00010769, GOSA_00016280
Amaranthaceae	Suaeda glauca	12	Sgl25015, Sgl25019, Sgl30158, Sgl30162, Sgl52391, Sgl57680 ... Sgl62316, Sgl67166, Sgl71398, Sgl71418, Sgl74988, Sgl75002
Amaranthaceae	Chenopodium album	13	gene:ENSEOMG00000005584, gene:ENSEOMG00000007608 ... gene:ENSEOMG00000011579, gene:ENSEOMG00000021310, gene:ENSEOMG00000022676, gene:ENSEOMG00000022696, gene:ENSEOMG00000022977, gene:ENSEOMG00000023299, gene:ENSEOMG00000025511, gene:ENSEOMG00000027470, gene:ENSEOMG00000029931, gene:ENSEOMG00000040402, gene:ENSEOMG00000050055
Amaranthaceae	Chenopodium quinoa	15	CQ.Regalona.r1.1BG0021120, CQ.Regalona.r1.2AG0023060 ... CQ.Regalona.r1.4BG0012550, CQ.Regalona.r1.5AG0004440, CQ.Regalona.r1.5AG0004450, CQ.Regalona.r1.5AG0004470, CQ.Regalona.r1.5AG0004480, CQ.Regalona.r1.5BG0004690, CQ.Regalona.r1.5BG0004840, CQ.Regalona.r1.5BG0004850, CQ.Regalona.r1.5BG0004870, CQ.Regalona.r1.5BG0004890, CQ.Regalona.r1.5BG0004900, CQ.Regalona.r1.7AG0019790, CQ.Regalona.r1.7BG0022350
Anacardiaceae	Pistacia vera	8	pistato.v30187460, pistato.v30187480, pistato.v30187490 ... pistato.v30187500, pistato.v30187510, pistato.v30187520, pistato.v30221940, pistato.v30283730
Apiaceae	Apium graveolens	26	Ag10G00383, Ag11G03062, Ag2G02603, Ag2G02604, Ag2G02605 ... Ag2G02606, Ag2G02607, Ag2G02616, Ag4G02750, Ag4G02751, Ag5G00590, Ag5G00775, Ag5G00776, Ag5G00782, Ag5G00803, Ag5G00826, Ag5G00830, Ag5G00832, Ag5G02495, Ag6G01534, Ag6G01748, Ag7G02278, Ag7G02280, Ag9G00896, Ag9G01084, Ag9G01085
Arecaceae	Cocos nucifera	3	COCNU_08G004160, COCNU_08G004170, contig69541135G000010
Arecaceae	Phoenix dactylifera	1	gene-LOC103711934
Asparagaceae	Asparagus officinalis	1	AsparagusV1_10.1771.V1.1
Asteraceae	Flaveria trinervia	7	Ftri18G18467, Ftri18G22214, Ftri18G29897, Ftri3G18437 ... Ftri5G04687, Ftri5G21573, Ftri6G08226
Brassicaceae	Arabidopsis thaliana	1	AT5G07610.1
Brassicaceae	Eutrema salsugineum	1	Thhalv10015553m.g.v1.0
Brassicaceae	Brassica nigra	2	BniB08g003310.2N, BniB08g003330.2N
Casuarinaceae	Casuarina glauca	1	Cgl02G1108
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-11405, nbisL1-mrna-11453
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG05.783
Plantaginaceae	Plantago ovata	41	Pov_00000383, Pov_00002431, Pov_00002432, Pov_00002516 ... Pov_00005603, Pov_00007557, Pov_00007610, Pov_00009964, Pov_00010712, Pov_00010877, Pov_00010883, Pov_00010884, Pov_00010885, Pov_00010888, Pov_00011194, Pov_00011198, Pov_00013082, Pov_00017394, Pov_00022234, Pov_00022335, Pov_00024258, Pov_00024998, Pov_00026511, Pov_00028463, Pov_00030072, Pov_00031800, Pov_00033077, Pov_00034150, Pov_00035309, Pov_00035325, Pov_00035587, Pov_00035590, Pov_00038668, Pov_00039529, Pov_00039530, Pov_00040163, Pov_00040197, Pov_00040578, Pov_00040583, Pov_00040672, Pov_00040673
Plumbaginaceae	Limonium bicolor	2	Lb4G21819, Lb5G27822
Poaceae	Echinochloa crus-galli	3	AH02.1487, CH02.1704, CH02.1706
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_1AG0014950, gene-QOZ80_1AG0014960 ... gene-QOZ80_2AG0138150, gene-QOZ80_2BG0193830
Poaceae	Oryza coarctata	3	Oco03G015950, Oco04G016580, Oco04G016590
Poaceae	Oryza sativa	2	LOC_Os02g41910.1, LOC_Os02g41930.1
Poaceae	Paspalum vaginatum	1	gene-BS78_K252200
Poaceae	Sporobolus alterniflorus	5	Chr02G022150, Chr02G022170, Chr03G007470, Chr05G013010 ... Chr05G013020
Poaceae	Zoysia japonica	1	nbis-gene-6525
Poaceae	Zoysia macrostachya	1	Zma_g10238
Portulacaceae	Portulaca oleracea	5	evm.TU.LG10.942, evm.TU.LG15.937, evm.TU.LG16.1338 ... evm.TU.LG17.932, evm.TU.LG20.1350
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_7_RagTag.1687
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-12434, nbisL1-mrna-12545, nbisL1-mrna-18536 ... nbisL1-mrna-19834, nbisL1-mrna-9544, nbisL1-mrna-9546
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-18621, nbisL1-mrna-6387
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-13611
Rhizophoraceae	Kandelia candel	1	evm.TU.utg000002l.50
Rhizophoraceae	Kandelia obovata	1	Maker00012024
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-17668, nbisL1-mrna-22082
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-12375
Salicaceae	Populus euphratica	13	populus_peu03087, populus_peu04414, populus_peu05785 ... populus_peu08180, populus_peu08201, populus_peu09672, populus_peu13476, populus_peu16134, populus_peu16165, populus_peu19810, populus_peu35236, populus_peu37234, populus_peu37457
Solanaceae	Lycium barbarum	13	gene-LOC132603319, gene-LOC132603322, gene-LOC132609885 ... gene-LOC132619387, gene-LOC132622444, gene-LOC132633056, gene-LOC132639197, gene-LOC132640088, gene-LOC132640090, gene-LOC132640091, gene-LOC132640596, gene-LOC132642121, gene-LOC132642175
Solanaceae	Solanum chilense	3	SOLCI002946500, SOLCI003651200, SOLCI004256900
Solanaceae	Solanum pennellii	6	gene-LOC107012822, gene-LOC107017347, gene-LOC107019311 ... gene-LOC107019763, gene-LOC107020107, gene-LOC107024080
Tamaricaceae	Reaumuria soongarica	3	STRG.12658_chr02_+, STRG.16278_chr06_+, STRG.964_chr01_-
Tamaricaceae	Tamarix chinensis	4	TC01G1522, TC02G3321, TC09G0346, TC10G0811