Basic Information
Locus ID:
jg13469
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
mitotic sister chromatid cohesion
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 14943966 | 14954639 | - | jg13469 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 85,290.31 Da | 59.45 | 74.87 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 70 | 367 | 9.95E-6 | IPR016024 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 612 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 693 | 717 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 555 | 592 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 693 | 764 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 737 | 752 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 502 | 525 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 430 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 404 | - | - |
| Coils | Coil | Coil | 54 | 74 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_011082306.1 | uncharacterized protein LOC105165116 isoform X1 [Sesamum indicum] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A6I9TMM7 | uncharacterized protein LOC105165116 isoform X1 OS=Sesamum indicum OX=4182 GN=LOC105165116 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology