Basic Information
Locus ID:
jg1337
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
leucine-rich repeat receptor-like protein kinase At5g49770
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 7669042 | 7675207 | - | jg1337 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 104,410.53 Da | 38.18 | 88.58 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 637 | 903 | 7.72316E-93 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 634 | 899 | 3.7E-47 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 377 | 5.1E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 617 | 911 | 3.01E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 182 | 4.5E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 404 | 4.5E-14 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 707 | 921 | 1.7E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 604 | 706 | 8.3E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 183 | 283 | 7.9E-21 | IPR032675 |
| SMART | SM00220 | serkin_6 | 631 | 904 | 6.2E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 631 | 904 | 38.915863 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 637 | 659 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 751 | 763 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011088111.2 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Sesamum indicum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7U3MPE1 | CARD1-like protein 3 OS=Phtheirospermum japonicum OX=374723 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology