Basic Information
Locus ID:
jg13278
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 13488723 | 13505251 | + | jg13278 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.05 | 95,471.46 Da | 44.52 | 97.30 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06623 | PKc_MAPKK_plant_like | 62 | 324 | 5.39729E-134 | - |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 509 | 664 | 7.0E-16 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 707 | 846 | 7.9E-20 | IPR004837 |
| Pfam | PF00069 | Protein kinase domain | 65 | 319 | 6.7E-63 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 64 | 320 | 3.1E-76 | IPR011009 |
| Gene3D | G3DSA:1.20.1420.30 | - | 575 | 850 | 2.0E-32 | IPR044880 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 143 | 329 | 2.4E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 46 | 142 | 7.8E-25 | - |
| SMART | SM00220 | serkin_6 | 64 | 319 | 1.8E-82 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 64 | 319 | 46.336212 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 177 | 189 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 70 | 93 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 678 | 699 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 56 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13320.1 | cation exchanger 2. low affinity calcium antiporter CAX2 | 0 |
| RefSeq | XP_020548308.1 | vacuolar cation/proton exchanger 3-like isoform X1 [Sesamum indicum] | 0 |
| Q5KQN0 | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6N2M1H3 | Protein kinase domain-containing protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS304079 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology